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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908489.1_cds_XP_016458613.1_52220
CDS Infomation

[gene=LOC107782261] [db_xref=GeneID:107782261] [protein=methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial-like] [protein_id=XP_016458613.1] [location=join(61495..61833,63321..63442,64494..64641,64873..65010,65194..65289,65362..65421,66450..66542,66613..66724,67953..68057,68859..68995,69113..69347,69436..69593,69695..69811,71782..72024,72134..72229,73172..73177)] [gbkey=CDS]
Sequence

ATGTCGTTAATGGCTTTTCTACTCCGGCGGAAAATACACACAAAACCCCACATTTTTCAT
CAAACATTACTCTACTCCACGGCACCATCAATAAAGAGTTCCAATAATCAACGAATTGAG
AAAATACTGATAGCAAATAGAGGCGAAATTGCTTGTAGAATTATCAAAACCGCTAAAAGA
TTAGGGATTCGTACCGTCGCAGTTTACAGTGATGCCGATAGAGATAGCTTGCACGTGAAG
TCCGCCGATGAGGCTTTTCGAATTGGTCCTCCCCCTGCACGTTTGAGCTATTTGAATTCT
TCTGCTATTATCGAAGCTGCTAATCGATCAGGCTCTCAGGCTATCCACCCAGGTTATGGT
TTCTTATCTGAAAGTGCTGACTTTGCTCGACTTTGTGAGGATGAGGGTCTCTCGTTTATA
GGACCTCCTGCCTCTGCAATCCGCGACATGGGTGATAAAAGTGCTTCAAAGAGAATTATG
GGTGCAGCTGGGGTTCCACTTGTGCCTGGATATCATGGTGATGAGCAAGATATTGACTTT
ATGAAGTTGGAAGCAGACAAGATTGGGTATCCTATTTTAATTAAGCCAACCCATGGAGGT
GGAGGGAAGGGTATGAGGATTGTTCAGAGTTCGAATGAATTTGCGGATTCATTCTTGGGG
GCCCAACGTGAGGCAGCTGCATCATTTGGTATAAGTACGATCCTACTGGAGAAATATATT
ACTAAACCAAGACACATAGAAGTCCAGATATTTGGGGATAAACAAGGTAATATTATACAT
CTCTATGAGAGAGATTGCAGTGTGCAGCGAAGACACCAGAAGATAATAGAAGAAGCTCCA
GCTCCTAATGTGAGCTCTGACTTCCGCTCCCACCTGGGTCAAGCAGCTGTATCTGCAGCT
AAGGCAGTTAATTACCATAGTGCAGGAACTGTTGAGTTTATAGTTGATACAGTATCTGGA
CAATTTTATTTTATGGAGATGAACACCCGTCTTCAGGTTGAGCATCCTGTTACAGAGATG
ATTGTTGGTCAAGATCTTGTGGAGTGGCAAATACGTGTTGCAAATGGGGAGCCTCTTCCC
TTGACTCAGTCTGAGGTGCCATTTTCAGGTCATGCTTTTGAAGCCCGAATTTATGCTGAA
AATGTTCCAAAAGGATTTCTTCCAGCAACTGGTGTTCTTCATCGTTATTGTCCTGTTACA
GTTACATCAGCAGTTAGAGTTGAGACTGGAGTTGTGGAAGGCGACACAGTAAGCATGCAT
TATGACCCCATGATTGCAAAGCTAGTAGTATGGGGACAAGACCGCCTTGCAGCACTTATA
AAAATGAAAGATTGCTTGTCAAAGTTTCAAGTTGCAGGTTTACCTACCAATATAGACTTT
CTCATTAAGCTTGCCAGCCATAGGGCTTTTCAAAATGGTGAAGTAGAAACTCATTTTATT
GAGCGGTACAAGGATGATCTGTTCATAGATGGTGCCACTTCGATATCAGCGCAAGAAGCT
GAGAGTGCTGCCAAACATGCCGCATCCATTGTAGCTGCATGCATTTGCCAAAAGGAACTT
GCAACATTGAGGGATAAGGCTTTTGGAGGCCTCCATTTGTGGTATGGTAATCCTCCATTC
AGAGTCCATCATTTTGCTAAGCGAAAAGTGGATCTTGAATGGGAAAATCAATACAATAAT
AGCGGTTCAGATCTTTTGACAGTCTCCATCACCTATTTGCCAGATGGGAAATACCTAGTT
GAGACAGGAGAAAGCAATTCCCCTGGTTTGGAGATCCAAGTGACACAACTAAGCAACAAT
GACTATAGAGTTGAAGTCAATGGTCTATGCCTGAATGTCTGCTTGGCTGCTTATTCCAAG
GATCAAATTGAGCATATTCACATCTGGCAGGGCAACTGCCAGCATCACTTCAAACAAAGG
ATGGGCCTTGAAATCTTTGATGATGATGAAACGATAGACAAGCCTGCTCGCATGGCAACA
TCTTATCCTTCTGGCACAGTGGTTGCACCCATGGCTGGTCTACTGGTTAAAGTTTTGGTG
AAGGATGGGGAGAAGGTTCAGGAGGGGCAACCTTTGTTGGTATTAGAAGCAATGAAGATG
GAGCATGTCGTGAAGGCACCATCTAATGGTTATGTAAGAGGGCTCGAAGTTAAAGTGGGC
CAATCGGTCCAAGATGGTGTTAAACTCTTGGCTATCAAGGACTAA

Peptide Sequence

PEP ID

XP_016458613.1
PEP Infomation

PREDICTED: methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial-like [Nicotiana tabacum]
Sequence

MSLMAFLLRRKIHTKPHIFHQTLLYSTAPSIKSSNNQRIEKILIANRGEIACRIIKTAKR
LGIRTVAVYSDADRDSLHVKSADEAFRIGPPPARLSYLNSSAIIEAANRSGSQAIHPGYG
FLSESADFARLCEDEGLSFIGPPASAIRDMGDKSASKRIMGAAGVPLVPGYHGDEQDIDF
MKLEADKIGYPILIKPTHGGGGKGMRIVQSSNEFADSFLGAQREAAASFGISTILLEKYI
TKPRHIEVQIFGDKQGNIIHLYERDCSVQRRHQKIIEEAPAPNVSSDFRSHLGQAAVSAA
KAVNYHSAGTVEFIVDTVSGQFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLP
LTQSEVPFSGHAFEARIYAENVPKGFLPATGVLHRYCPVTVTSAVRVETGVVEGDTVSMH
YDPMIAKLVVWGQDRLAALIKMKDCLSKFQVAGLPTNIDFLIKLASHRAFQNGEVETHFI
ERYKDDLFIDGATSISAQEAESAAKHAASIVAACICQKELATLRDKAFGGLHLWYGNPPF
RVHHFAKRKVDLEWENQYNNSGSDLLTVSITYLPDGKYLVETGESNSPGLEIQVTQLSNN
DYRVEVNGLCLNVCLAAYSKDQIEHIHIWQGNCQHHFKQRMGLEIFDDDETIDKPARMAT
SYPSGTVVAPMAGLLVKVLVKDGEKVQEGQPLLVLEAMKMEHVVKAPSNGYVRGLEVKVG
QSVQDGVKLLAIKD

Transcript Sequence

Gene sequence data has not been registered.